Cluster: Rep_3502_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3502
- CGC Family ID: CGCFAM_01007
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3502_c_2 | Rep_3502_c_2_18 | 17043 | 17819 | - | GH25 |
| pfam | Rep_3502_c_2 | Rep_3502_c_2_19 | 18012 | 19052 | + | DAHP_synth_1 |
| TC | Rep_3502_c_2 | Rep_3502_c_2_20 | 19181 | 20173 | + | 3.A.1.34.1 |
| TC | Rep_3502_c_2 | Rep_3502_c_2_21 | 20281 | 21213 | + | 3.A.1.34.1 |
| TC | Rep_3502_c_2 | Rep_3502_c_2_22 | 21206 | 22015 | + | 3.A.1.34.1 |
Gene ID: Rep_3502_c_2_18
Type: CAZyme
Location: 17043 - 17819 (-)
Type: CAZyme
Location: 17043 - 17819 (-)
Gene ID: Rep_3502_c_2_19
Type: pfam
Location: 18012 - 19052 (+)
Type: pfam
Location: 18012 - 19052 (+)
Gene ID: Rep_3502_c_2_20
Type: TC
Location: 19181 - 20173 (+)
Type: TC
Location: 19181 - 20173 (+)
Gene ID: Rep_3502_c_2_21
Type: TC
Location: 20281 - 21213 (+)
Type: TC
Location: 20281 - 21213 (+)
Gene ID: Rep_3502_c_2_22
Type: TC
Location: 21206 - 22015 (+)
Type: TC
Location: 21206 - 22015 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944385025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.