Cluster: Rep_3502_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3502
- CGC Family ID: CGCFAM_01468
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3502_c_27 | Rep_3502_c_27_98 | 117980 | 119833 | - | 3.A.1.135.5 |
| TC | Rep_3502_c_27 | Rep_3502_c_27_99 | 119833 | 121584 | - | 3.A.1.135.5 |
| TF | Rep_3502_c_27 | Rep_3502_c_27_100 | 121577 | 122044 | - | MarR |
| pfam | Rep_3502_c_27 | Rep_3502_c_27_101 | 122203 | 123051 | + | RrnaAD |
| TC | Rep_3502_c_27 | Rep_3502_c_27_102 | 123092 | 124477 | + | 2.A.66.1.32 |
| pfam | Rep_3502_c_27 | Rep_3502_c_27_103 | 124513 | 125598 | + | Acyl_transf_3 |
| CAZyme | Rep_3502_c_27 | Rep_3502_c_27_104 | 125641 | 126951 | - | GH27 |
Gene ID: Rep_3502_c_27_98
Type: TC
Location: 117980 - 119833 (-)
Type: TC
Location: 117980 - 119833 (-)
Gene ID: Rep_3502_c_27_99
Type: TC
Location: 119833 - 121584 (-)
Type: TC
Location: 119833 - 121584 (-)
Gene ID: Rep_3502_c_27_100
Type: TF
Location: 121577 - 122044 (-)
Type: TF
Location: 121577 - 122044 (-)
Gene ID: Rep_3502_c_27_101
Type: pfam
Location: 122203 - 123051 (+)
Type: pfam
Location: 122203 - 123051 (+)
Gene ID: Rep_3502_c_27_102
Type: TC
Location: 123092 - 124477 (+)
Type: TC
Location: 123092 - 124477 (+)
Gene ID: Rep_3502_c_27_103
Type: pfam
Location: 124513 - 125598 (+)
Type: pfam
Location: 124513 - 125598 (+)
Gene ID: Rep_3502_c_27_104
Type: CAZyme
Location: 125641 - 126951 (-)
Type: CAZyme
Location: 125641 - 126951 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944385025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.