Cluster: Rep_3502_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3502
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3502_c_27 | Rep_3502_c_27_88 | 108101 | 109051 | - | GT2 |
| TC | Rep_3502_c_27 | Rep_3502_c_27_89 | 109149 | 109742 | - | 2.A.87.1.3 |
| pfam | Rep_3502_c_27 | Rep_3502_c_27_90 | 110044 | 110760 | + | DUF421 |
| TF | Rep_3502_c_27 | Rep_3502_c_27_91 | 110804 | 111151 | + | HTH_5 |
| TC | Rep_3502_c_27 | Rep_3502_c_27_92 | 111154 | 113151 | + | 3.A.3.6.10 |
Gene ID: Rep_3502_c_27_88
Type: CAZyme
Location: 108101 - 109051 (-)
Type: CAZyme
Location: 108101 - 109051 (-)
Gene ID: Rep_3502_c_27_89
Type: TC
Location: 109149 - 109742 (-)
Type: TC
Location: 109149 - 109742 (-)
Gene ID: Rep_3502_c_27_90
Type: pfam
Location: 110044 - 110760 (+)
Type: pfam
Location: 110044 - 110760 (+)
Gene ID: Rep_3502_c_27_91
Type: TF
Location: 110804 - 111151 (+)
Type: TF
Location: 110804 - 111151 (+)
Gene ID: Rep_3502_c_27_92
Type: TC
Location: 111154 - 113151 (+)
Type: TC
Location: 111154 - 113151 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944385025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.