Cluster: Rep_3502_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3502
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3502_c_25 | Rep_3502_c_25_10 | 9721 | 11730 | + | CBM48 | GH13_9 |
| pfam | Rep_3502_c_25 | Rep_3502_c_25_11 | 11744 | 12952 | + | NTP_transferase | Hexapep_GlmU |
| pfam | Rep_3502_c_25 | Rep_3502_c_25_12 | 12956 | 14074 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | Rep_3502_c_25 | Rep_3502_c_25_13 | 14084 | 15502 | + | GT5 |
| TC | Rep_3502_c_25 | Rep_3502_c_25_14 | 15901 | 16836 | - | 1.A.35.3.2 |
Gene ID: Rep_3502_c_25_10
Type: CAZyme
Location: 9721 - 11730 (+)
Type: CAZyme
Location: 9721 - 11730 (+)
Gene ID: Rep_3502_c_25_11
Type: pfam
Location: 11744 - 12952 (+)
Type: pfam
Location: 11744 - 12952 (+)
Gene ID: Rep_3502_c_25_12
Type: pfam
Location: 12956 - 14074 (+)
Type: pfam
Location: 12956 - 14074 (+)
Gene ID: Rep_3502_c_25_13
Type: CAZyme
Location: 14084 - 15502 (+)
Type: CAZyme
Location: 14084 - 15502 (+)
Gene ID: Rep_3502_c_25_14
Type: TC
Location: 15901 - 16836 (-)
Type: TC
Location: 15901 - 16836 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944385025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.