Cluster: Rep_3502_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3502
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3502_c_23 | Rep_3502_c_23_36 | 30951 | 31892 | - | GH43_32 |
| TC | Rep_3502_c_23 | Rep_3502_c_23_37 | 31964 | 32533 | - | 3.A.1.25.5 |
| pfam | Rep_3502_c_23 | Rep_3502_c_23_38 | 32646 | 33329 | - | Hydrolase | Hydrolase_like | HAD_2 |
| TC | Rep_3502_c_23 | Rep_3502_c_23_39 | 33398 | 34264 | - | 2.A.1.46.5 |
Gene ID: Rep_3502_c_23_36
Type: CAZyme
Location: 30951 - 31892 (-)
Type: CAZyme
Location: 30951 - 31892 (-)
Gene ID: Rep_3502_c_23_37
Type: TC
Location: 31964 - 32533 (-)
Type: TC
Location: 31964 - 32533 (-)
Gene ID: Rep_3502_c_23_38
Type: pfam
Location: 32646 - 33329 (-)
Type: pfam
Location: 32646 - 33329 (-)
Gene ID: Rep_3502_c_23_39
Type: TC
Location: 33398 - 34264 (-)
Type: TC
Location: 33398 - 34264 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944385025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.