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Cluster: Rep_3502_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3502_c_21 Rep_3502_c_21_60 64709 65293 - 3.D.1.4.2
TC Rep_3502_c_21 Rep_3502_c_21_61 65306 66385 - 3.D.1.4.2
pfam Rep_3502_c_21 Rep_3502_c_21_62 66385 66780 - Complex1_30kDa
TC Rep_3502_c_21 Rep_3502_c_21_63 66777 67217 - 3.D.1.4.2
TC Rep_3502_c_21 Rep_3502_c_21_64 67221 68111 - 3.D.1.4.2
TC Rep_3502_c_21 Rep_3502_c_21_65 68111 70021 - 3.D.1.4.2
CAZyme Rep_3502_c_21 Rep_3502_c_21_66 70269 71600 + CE4
TC Rep_3502_c_21 Rep_3502_c_21_67 71634 72356 - 3.A.1.3.25
TC Rep_3502_c_21 Rep_3502_c_21_68 72340 73050 - 3.A.1.3.20
TC Rep_3502_c_21 Rep_3502_c_21_69 73214 74077 - 3.A.1.3.2
Gene ID: Rep_3502_c_21_60
Type: TC
Location: 64709 - 65293 (-)
Gene ID: Rep_3502_c_21_61
Type: TC
Location: 65306 - 66385 (-)
Gene ID: Rep_3502_c_21_62
Type: pfam
Location: 66385 - 66780 (-)
Gene ID: Rep_3502_c_21_63
Type: TC
Location: 66777 - 67217 (-)
Gene ID: Rep_3502_c_21_64
Type: TC
Location: 67221 - 68111 (-)
Gene ID: Rep_3502_c_21_65
Type: TC
Location: 68111 - 70021 (-)
Gene ID: Rep_3502_c_21_66
Type: CAZyme
Location: 70269 - 71600 (+)
Gene ID: Rep_3502_c_21_67
Type: TC
Location: 71634 - 72356 (-)
Gene ID: Rep_3502_c_21_68
Type: TC
Location: 72340 - 73050 (-)
Gene ID: Rep_3502_c_21_69
Type: TC
Location: 73214 - 74077 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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