Cluster: Rep_3502_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3502
- CGC Family ID: CGCFAM_03520
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3502_c_17 | Rep_3502_c_17_113 | 122611 | 125595 | - | GH2 |
| pfam | Rep_3502_c_17 | Rep_3502_c_17_114 | 125655 | 126863 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| CAZyme | Rep_3502_c_17 | Rep_3502_c_17_115 | 127004 | 128344 | + | GH33 |
| CAZyme | Rep_3502_c_17 | Rep_3502_c_17_116 | 128546 | 130198 | + | GH43_4 |
| pfam | Rep_3502_c_17 | Rep_3502_c_17_117 | 130240 | 131109 | - | Amidohydro_2 |
| pfam | Rep_3502_c_17 | Rep_3502_c_17_118 | 131521 | 132615 | - | APH |
| TC | Rep_3502_c_17 | Rep_3502_c_17_119 | 132709 | 133962 | - | 3.A.1.122.2 |
Gene ID: Rep_3502_c_17_113
Type: CAZyme
Location: 122611 - 125595 (-)
Type: CAZyme
Location: 122611 - 125595 (-)
Gene ID: Rep_3502_c_17_114
Type: pfam
Location: 125655 - 126863 (-)
Type: pfam
Location: 125655 - 126863 (-)
Gene ID: Rep_3502_c_17_115
Type: CAZyme
Location: 127004 - 128344 (+)
Type: CAZyme
Location: 127004 - 128344 (+)
Gene ID: Rep_3502_c_17_116
Type: CAZyme
Location: 128546 - 130198 (+)
Type: CAZyme
Location: 128546 - 130198 (+)
Gene ID: Rep_3502_c_17_117
Type: pfam
Location: 130240 - 131109 (-)
Type: pfam
Location: 130240 - 131109 (-)
Gene ID: Rep_3502_c_17_118
Type: pfam
Location: 131521 - 132615 (-)
Type: pfam
Location: 131521 - 132615 (-)
Gene ID: Rep_3502_c_17_119
Type: TC
Location: 132709 - 133962 (-)
Type: TC
Location: 132709 - 133962 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944385025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.