Cluster: Rep_3502_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3502
- CGC Family ID: CGCFAM_00271
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3502_c_17 | Rep_3502_c_17_76 | 81704 | 82450 | - | 3.A.1.122.14 |
| TC | Rep_3502_c_17 | Rep_3502_c_17_77 | 82559 | 83002 | + | 9.A.11.1.1 |
| STP | Rep_3502_c_17 | Rep_3502_c_17_78 | 83057 | 84430 | - | PALP |
| NULL(UNKNOWN) | Rep_3502_c_17 | Rep_3502_c_17_79 | 84791 | 84949 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3502_c_17 | Rep_3502_c_17_80 | 84951 | 85952 | - | 9.A.11.1.1 |
| CAZyme | Rep_3502_c_17 | Rep_3502_c_17_81 | 86002 | 87867 | - | GH13_39 |
| CAZyme | Rep_3502_c_17 | Rep_3502_c_17_82 | 87922 | 90546 | - | GT35 |
Gene ID: Rep_3502_c_17_76
Type: TC
Location: 81704 - 82450 (-)
Type: TC
Location: 81704 - 82450 (-)
Gene ID: Rep_3502_c_17_77
Type: TC
Location: 82559 - 83002 (+)
Type: TC
Location: 82559 - 83002 (+)
Gene ID: Rep_3502_c_17_78
Type: STP
Location: 83057 - 84430 (-)
Type: STP
Location: 83057 - 84430 (-)
Gene ID: Rep_3502_c_17_79
Type:
Location: 84791 - 84949 (-)
Type:
Location: 84791 - 84949 (-)
Gene ID: Rep_3502_c_17_80
Type: TC
Location: 84951 - 85952 (-)
Type: TC
Location: 84951 - 85952 (-)
Gene ID: Rep_3502_c_17_81
Type: CAZyme
Location: 86002 - 87867 (-)
Type: CAZyme
Location: 86002 - 87867 (-)
Gene ID: Rep_3502_c_17_82
Type: CAZyme
Location: 87922 - 90546 (-)
Type: CAZyme
Location: 87922 - 90546 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944385025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.