Cluster: Rep_3502_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3502
- CGC Family ID: CGCFAM_00611
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3502_c_11 | Rep_3502_c_11_16 | 17302 | 19596 | - | GH31_15 |
| pfam | Rep_3502_c_11 | Rep_3502_c_11_17 | 19713 | 21887 | - | UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor |
| TC | Rep_3502_c_11 | Rep_3502_c_11_18 | 21944 | 23152 | - | 3.B.1.1.2 |
Gene ID: Rep_3502_c_11_16
Type: CAZyme
Location: 17302 - 19596 (-)
Type: CAZyme
Location: 17302 - 19596 (-)
Gene ID: Rep_3502_c_11_17
Type: pfam
Location: 19713 - 21887 (-)
Type: pfam
Location: 19713 - 21887 (-)
Gene ID: Rep_3502_c_11_18
Type: TC
Location: 21944 - 23152 (-)
Type: TC
Location: 21944 - 23152 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944385025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.