Cluster: Rep_3502_CGC11
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3502
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3502_c_10 | Rep_3502_c_10_71 | 50748 | 51356 | + | 2.A.115.2.14 |
| pfam | Rep_3502_c_10 | Rep_3502_c_10_72 | 51396 | 52082 | - | His_biosynth | NMO | NanE | ThiG |
| pfam | Rep_3502_c_10 | Rep_3502_c_10_73 | 52150 | 53046 | + | DHDPS |
| CAZyme | Rep_3502_c_10 | Rep_3502_c_10_74 | 53099 | 55348 | - | GH2 |
| TC | Rep_3502_c_10 | Rep_3502_c_10_75 | 55345 | 56697 | - | 2.A.2.3.1 |
| pfam | Rep_3502_c_10 | Rep_3502_c_10_76 | 56859 | 57842 | - | PHP |
| CAZyme | Rep_3502_c_10 | Rep_3502_c_10_77 | 57852 | 59195 | - | GH30_4 |
| TC | Rep_3502_c_10 | Rep_3502_c_10_78 | 59199 | 60764 | - | 2.A.49.5.5 |
| TF | Rep_3502_c_10 | Rep_3502_c_10_79 | 61075 | 61821 | + | HTH_DeoR |
| STP | Rep_3502_c_10 | Rep_3502_c_10_80 | 61822 | 62742 | + | PfkB |
| TC | Rep_3502_c_10 | Rep_3502_c_10_81 | 62746 | 64686 | + | 4.A.2.1.20 |
| STP | Rep_3502_c_10 | Rep_3502_c_10_82 | 64698 | 64961 | + | PTS-HPr |
| TC | Rep_3502_c_10 | Rep_3502_c_10_83 | 65020 | 66639 | + | 8.A.7.1.1 |
Gene ID: Rep_3502_c_10_71
Type: TC
Location: 50748 - 51356 (+)
Type: TC
Location: 50748 - 51356 (+)
Gene ID: Rep_3502_c_10_72
Type: pfam
Location: 51396 - 52082 (-)
Type: pfam
Location: 51396 - 52082 (-)
Gene ID: Rep_3502_c_10_73
Type: pfam
Location: 52150 - 53046 (+)
Type: pfam
Location: 52150 - 53046 (+)
Gene ID: Rep_3502_c_10_74
Type: CAZyme
Location: 53099 - 55348 (-)
Type: CAZyme
Location: 53099 - 55348 (-)
Gene ID: Rep_3502_c_10_75
Type: TC
Location: 55345 - 56697 (-)
Type: TC
Location: 55345 - 56697 (-)
Gene ID: Rep_3502_c_10_76
Type: pfam
Location: 56859 - 57842 (-)
Type: pfam
Location: 56859 - 57842 (-)
Gene ID: Rep_3502_c_10_77
Type: CAZyme
Location: 57852 - 59195 (-)
Type: CAZyme
Location: 57852 - 59195 (-)
Gene ID: Rep_3502_c_10_78
Type: TC
Location: 59199 - 60764 (-)
Type: TC
Location: 59199 - 60764 (-)
Gene ID: Rep_3502_c_10_79
Type: TF
Location: 61075 - 61821 (+)
Type: TF
Location: 61075 - 61821 (+)
Gene ID: Rep_3502_c_10_80
Type: STP
Location: 61822 - 62742 (+)
Type: STP
Location: 61822 - 62742 (+)
Gene ID: Rep_3502_c_10_81
Type: TC
Location: 62746 - 64686 (+)
Type: TC
Location: 62746 - 64686 (+)
Gene ID: Rep_3502_c_10_82
Type: STP
Location: 64698 - 64961 (+)
Type: STP
Location: 64698 - 64961 (+)
Gene ID: Rep_3502_c_10_83
Type: TC
Location: 65020 - 66639 (+)
Type: TC
Location: 65020 - 66639 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944385025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.