Cluster: Rep_3501_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3501
- CGC Family ID: CGCFAM_10151
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3501_c_3 | Rep_3501_c_3_20 | 19158 | 19979 | - | 3.A.1.132.3 |
| TF | Rep_3501_c_3 | Rep_3501_c_3_21 | 20033 | 20620 | - | LexA_DNA_bind |
| CAZyme | Rep_3501_c_3 | Rep_3501_c_3_22 | 21350 | 23371 | + | GH163 |
Gene ID: Rep_3501_c_3_20
Type: TC
Location: 19158 - 19979 (-)
Type: TC
Location: 19158 - 19979 (-)
Gene ID: Rep_3501_c_3_21
Type: TF
Location: 20033 - 20620 (-)
Type: TF
Location: 20033 - 20620 (-)
Gene ID: Rep_3501_c_3_22
Type: CAZyme
Location: 21350 - 23371 (+)
Type: CAZyme
Location: 21350 - 23371 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp017886765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.