Cluster: Rep_3501_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3501
- CGC Family ID: CGCFAM_00330
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3501_c_62 | Rep_3501_c_62_4 | 1702 | 3435 | + | 3.A.1.135.5 |
| TC | Rep_3501_c_62 | Rep_3501_c_62_5 | 3450 | 5354 | + | 3.A.1.135.5 |
| pfam | Rep_3501_c_62 | Rep_3501_c_62_6 | 5498 | 5998 | - | SpoU_methylase |
| CAZyme | Rep_3501_c_62 | Rep_3501_c_62_7 | 5982 | 7097 | - | CE9 |
Gene ID: Rep_3501_c_62_4
Type: TC
Location: 1702 - 3435 (+)
Type: TC
Location: 1702 - 3435 (+)
Gene ID: Rep_3501_c_62_5
Type: TC
Location: 3450 - 5354 (+)
Type: TC
Location: 3450 - 5354 (+)
Gene ID: Rep_3501_c_62_6
Type: pfam
Location: 5498 - 5998 (-)
Type: pfam
Location: 5498 - 5998 (-)
Gene ID: Rep_3501_c_62_7
Type: CAZyme
Location: 5982 - 7097 (-)
Type: CAZyme
Location: 5982 - 7097 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp017886765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.