Cluster: Rep_3501_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3501
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3501_c_46 | Rep_3501_c_46_4 | 5306 | 6088 | + | 8.A.3.2.3 |
| TC | Rep_3501_c_46 | Rep_3501_c_46_5 | 6088 | 6903 | + | 8.A.3.2.1 |
| TC | Rep_3501_c_46 | Rep_3501_c_46_6 | 6919 | 8415 | + | 9.B.18.1.2 |
| CAZyme | Rep_3501_c_46 | Rep_3501_c_46_7 | 8455 | 9579 | + | GT4 |
| CAZyme | Rep_3501_c_46 | Rep_3501_c_46_8 | 9576 | 10796 | + | GT4 |
Gene ID: Rep_3501_c_46_4
Type: TC
Location: 5306 - 6088 (+)
Type: TC
Location: 5306 - 6088 (+)
Gene ID: Rep_3501_c_46_5
Type: TC
Location: 6088 - 6903 (+)
Type: TC
Location: 6088 - 6903 (+)
Gene ID: Rep_3501_c_46_6
Type: TC
Location: 6919 - 8415 (+)
Type: TC
Location: 6919 - 8415 (+)
Gene ID: Rep_3501_c_46_7
Type: CAZyme
Location: 8455 - 9579 (+)
Type: CAZyme
Location: 8455 - 9579 (+)
Gene ID: Rep_3501_c_46_8
Type: CAZyme
Location: 9576 - 10796 (+)
Type: CAZyme
Location: 9576 - 10796 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp017886765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.