Cluster: Rep_3501_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3501
- CGC Family ID: CGCFAM_10250
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3501_c_1 | Rep_3501_c_1_22 | 22535 | 22900 | - | 9.B.55.2.1 |
| pfam | Rep_3501_c_1 | Rep_3501_c_1_23 | 23216 | 23662 | + | NfeD |
| TC | Rep_3501_c_1 | Rep_3501_c_1_24 | 23684 | 24607 | + | 8.A.21.2.2 |
| CAZyme | Rep_3501_c_1 | Rep_3501_c_1_25 | 24671 | 26023 | - | GH29 |
| pfam | Rep_3501_c_1 | Rep_3501_c_1_26 | 26045 | 28486 | - | MFS_2 |
| TC | Rep_3501_c_1 | Rep_3501_c_1_27 | 28863 | 30380 | - | 2.A.2.3.2 |
Gene ID: Rep_3501_c_1_22
Type: TC
Location: 22535 - 22900 (-)
Type: TC
Location: 22535 - 22900 (-)
Gene ID: Rep_3501_c_1_23
Type: pfam
Location: 23216 - 23662 (+)
Type: pfam
Location: 23216 - 23662 (+)
Gene ID: Rep_3501_c_1_24
Type: TC
Location: 23684 - 24607 (+)
Type: TC
Location: 23684 - 24607 (+)
Gene ID: Rep_3501_c_1_25
Type: CAZyme
Location: 24671 - 26023 (-)
Type: CAZyme
Location: 24671 - 26023 (-)
Gene ID: Rep_3501_c_1_26
Type: pfam
Location: 26045 - 28486 (-)
Type: pfam
Location: 26045 - 28486 (-)
Gene ID: Rep_3501_c_1_27
Type: TC
Location: 28863 - 30380 (-)
Type: TC
Location: 28863 - 30380 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp017886765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.