Cluster: Rep_3501_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3501
- CGC Family ID: CGCFAM_06188
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3501_c_27 | Rep_3501_c_27_3 | 2598 | 3071 | + | 3.D.1.6.1 |
| TC | Rep_3501_c_27 | Rep_3501_c_27_4 | 3071 | 4825 | + | 3.D.1.5.1 |
| TC | Rep_3501_c_27 | Rep_3501_c_27_5 | 4842 | 7052 | + | 3.D.1.5.1 |
| pfam | Rep_3501_c_27 | Rep_3501_c_27_6 | 7064 | 7732 | + | cobW |
| pfam | Rep_3501_c_27 | Rep_3501_c_27_7 | 7732 | 8070 | + | HypA |
| CAZyme | Rep_3501_c_27 | Rep_3501_c_27_8 | 8324 | 9985 | - | GH13_31 |
Gene ID: Rep_3501_c_27_3
Type: TC
Location: 2598 - 3071 (+)
Type: TC
Location: 2598 - 3071 (+)
Gene ID: Rep_3501_c_27_4
Type: TC
Location: 3071 - 4825 (+)
Type: TC
Location: 3071 - 4825 (+)
Gene ID: Rep_3501_c_27_5
Type: TC
Location: 4842 - 7052 (+)
Type: TC
Location: 4842 - 7052 (+)
Gene ID: Rep_3501_c_27_6
Type: pfam
Location: 7064 - 7732 (+)
Type: pfam
Location: 7064 - 7732 (+)
Gene ID: Rep_3501_c_27_7
Type: pfam
Location: 7732 - 8070 (+)
Type: pfam
Location: 7732 - 8070 (+)
Gene ID: Rep_3501_c_27_8
Type: CAZyme
Location: 8324 - 9985 (-)
Type: CAZyme
Location: 8324 - 9985 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp017886765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.