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Cluster: Rep_3501_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3501_c_26 Rep_3501_c_26_2 124 3312 - GH38
CAZyme Rep_3501_c_26 Rep_3501_c_26_3 3334 4698 - GH4
TF Rep_3501_c_26 Rep_3501_c_26_4 4785 5720 + HTH_AraC
TC Rep_3501_c_26 Rep_3501_c_26_5 5847 7415 + 2.A.2.3.4
sulfatase Rep_3501_c_26 Rep_3501_c_26_6 7521 8846 - S1_65
TC Rep_3501_c_26 Rep_3501_c_26_7 8870 9658 - 2.A.102.4.4
pfam Rep_3501_c_26 Rep_3501_c_26_8 9693 10220 - Flavodoxin_5
pfam Rep_3501_c_26 Rep_3501_c_26_9 10286 11356 - Methyltransf_21
TC Rep_3501_c_26 Rep_3501_c_26_10 11529 12353 + 9.A.40.1.1
Gene ID: Rep_3501_c_26_2
Type: CAZyme
Location: 124 - 3312 (-)
Gene ID: Rep_3501_c_26_3
Type: CAZyme
Location: 3334 - 4698 (-)
Gene ID: Rep_3501_c_26_4
Type: TF
Location: 4785 - 5720 (+)
Gene ID: Rep_3501_c_26_5
Type: TC
Location: 5847 - 7415 (+)
Gene ID: Rep_3501_c_26_6
Type: sulfatase
Location: 7521 - 8846 (-)
Gene ID: Rep_3501_c_26_7
Type: TC
Location: 8870 - 9658 (-)
Gene ID: Rep_3501_c_26_8
Type: pfam
Location: 9693 - 10220 (-)
Gene ID: Rep_3501_c_26_9
Type: pfam
Location: 10286 - 11356 (-)
Gene ID: Rep_3501_c_26_10
Type: TC
Location: 11529 - 12353 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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