Cluster: Rep_3501_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3501
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3501_c_19 | Rep_3501_c_19_60 | 53177 | 54520 | - | GH33 |
| pfam | Rep_3501_c_19 | Rep_3501_c_19_61 | 54682 | 55890 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| pfam | Rep_3501_c_19 | Rep_3501_c_19_62 | 55987 | 56535 | - | Ribosomal_S30AE | Ribosom_S30AE_C |
| CAZyme | Rep_3501_c_19 | Rep_3501_c_19_63 | 56737 | 58287 | + | GH28 |
| TC | Rep_3501_c_19 | Rep_3501_c_19_64 | 58555 | 59733 | + | 3.B.1.1.5 |
Gene ID: Rep_3501_c_19_60
Type: CAZyme
Location: 53177 - 54520 (-)
Type: CAZyme
Location: 53177 - 54520 (-)
Gene ID: Rep_3501_c_19_61
Type: pfam
Location: 54682 - 55890 (+)
Type: pfam
Location: 54682 - 55890 (+)
Gene ID: Rep_3501_c_19_62
Type: pfam
Location: 55987 - 56535 (-)
Type: pfam
Location: 55987 - 56535 (-)
Gene ID: Rep_3501_c_19_63
Type: CAZyme
Location: 56737 - 58287 (+)
Type: CAZyme
Location: 56737 - 58287 (+)
Gene ID: Rep_3501_c_19_64
Type: TC
Location: 58555 - 59733 (+)
Type: TC
Location: 58555 - 59733 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp017886765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.