Cluster: Rep_3495_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3495
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3495_c_49 | Rep_3495_c_49_9 | 11454 | 12311 | - | CE4 |
| TC | Rep_3495_c_49 | Rep_3495_c_49_10 | 12525 | 14645 | + | 1.B.52.2.1 |
| pfam | Rep_3495_c_49 | Rep_3495_c_49_11 | 14673 | 15752 | + | PFK |
| STP | Rep_3495_c_49 | Rep_3495_c_49_12 | 15772 | 16629 | + | Spo0A_C |
| TC | Rep_3495_c_49 | Rep_3495_c_49_13 | 16811 | 17512 | + | 3.A.1.122.7 |
Gene ID: Rep_3495_c_49_9
Type: CAZyme
Location: 11454 - 12311 (-)
Type: CAZyme
Location: 11454 - 12311 (-)
Gene ID: Rep_3495_c_49_10
Type: TC
Location: 12525 - 14645 (+)
Type: TC
Location: 12525 - 14645 (+)
Gene ID: Rep_3495_c_49_11
Type: pfam
Location: 14673 - 15752 (+)
Type: pfam
Location: 14673 - 15752 (+)
Gene ID: Rep_3495_c_49_12
Type: STP
Location: 15772 - 16629 (+)
Type: STP
Location: 15772 - 16629 (+)
Gene ID: Rep_3495_c_49_13
Type: TC
Location: 16811 - 17512 (+)
Type: TC
Location: 16811 - 17512 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.