Cluster: Rep_3495_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3495
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3495_c_47 | Rep_3495_c_47_65 | 76008 | 77249 | - | CE17 |
| NULL(UNKNOWN) | Rep_3495_c_47 | Rep_3495_c_47_66 | 77251 | 78282 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3495_c_47 | Rep_3495_c_47_67 | 78360 | 79502 | - | 3.A.1.1.24 |
| pfam | Rep_3495_c_47 | Rep_3495_c_47_68 | 79718 | 80446 | - | PseudoU_synth_2 | S4 |
| pfam | Rep_3495_c_47 | Rep_3495_c_47_69 | 80478 | 80936 | - | DUF4830 |
| TC | Rep_3495_c_47 | Rep_3495_c_47_70 | 81394 | 82131 | + | 8.A.3.2.2 |
Gene ID: Rep_3495_c_47_65
Type: CAZyme
Location: 76008 - 77249 (-)
Type: CAZyme
Location: 76008 - 77249 (-)
Gene ID: Rep_3495_c_47_66
Type:
Location: 77251 - 78282 (-)
Type:
Location: 77251 - 78282 (-)
Gene ID: Rep_3495_c_47_67
Type: TC
Location: 78360 - 79502 (-)
Type: TC
Location: 78360 - 79502 (-)
Gene ID: Rep_3495_c_47_68
Type: pfam
Location: 79718 - 80446 (-)
Type: pfam
Location: 79718 - 80446 (-)
Gene ID: Rep_3495_c_47_69
Type: pfam
Location: 80478 - 80936 (-)
Type: pfam
Location: 80478 - 80936 (-)
Gene ID: Rep_3495_c_47_70
Type: TC
Location: 81394 - 82131 (+)
Type: TC
Location: 81394 - 82131 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.