Cluster: Rep_3495_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3495
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3495_c_35 | Rep_3495_c_35_25 | 20773 | 22284 | - | CE20 |
| TC | Rep_3495_c_35 | Rep_3495_c_35_26 | 22333 | 23940 | - | 3.A.1.121.4 |
| pfam | Rep_3495_c_35 | Rep_3495_c_35_27 | 24478 | 25032 | - | FMN_red |
| pfam | Rep_3495_c_35 | Rep_3495_c_35_28 | 25779 | 26693 | + | Lactamase_B | Lactamase_B_2 |
| CAZyme | Rep_3495_c_35 | Rep_3495_c_35_29 | 26767 | 28644 | - | GH5_4 |
Gene ID: Rep_3495_c_35_25
Type: CAZyme
Location: 20773 - 22284 (-)
Type: CAZyme
Location: 20773 - 22284 (-)
Gene ID: Rep_3495_c_35_26
Type: TC
Location: 22333 - 23940 (-)
Type: TC
Location: 22333 - 23940 (-)
Gene ID: Rep_3495_c_35_27
Type: pfam
Location: 24478 - 25032 (-)
Type: pfam
Location: 24478 - 25032 (-)
Gene ID: Rep_3495_c_35_28
Type: pfam
Location: 25779 - 26693 (+)
Type: pfam
Location: 25779 - 26693 (+)
Gene ID: Rep_3495_c_35_29
Type: CAZyme
Location: 26767 - 28644 (-)
Type: CAZyme
Location: 26767 - 28644 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.