Cluster: Rep_3495_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3495
- CGC Family ID: CGCFAM_11283
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3495_c_104 | Rep_3495_c_104_30 | 32479 | 33642 | + | GH5_4 |
| CAZyme | Rep_3495_c_104 | Rep_3495_c_104_31 | 33711 | 35216 | - | CE2 |
| pfam | Rep_3495_c_104 | Rep_3495_c_104_32 | 35387 | 36673 | - | Adenylsucc_synt |
| pfam | Rep_3495_c_104 | Rep_3495_c_104_33 | 36898 | 37245 | + | Trns_repr_metal |
| TC | Rep_3495_c_104 | Rep_3495_c_104_34 | 37260 | 39797 | + | 3.A.3.5.15 |
Gene ID: Rep_3495_c_104_30
Type: CAZyme
Location: 32479 - 33642 (+)
Type: CAZyme
Location: 32479 - 33642 (+)
Gene ID: Rep_3495_c_104_31
Type: CAZyme
Location: 33711 - 35216 (-)
Type: CAZyme
Location: 33711 - 35216 (-)
Gene ID: Rep_3495_c_104_32
Type: pfam
Location: 35387 - 36673 (-)
Type: pfam
Location: 35387 - 36673 (-)
Gene ID: Rep_3495_c_104_33
Type: pfam
Location: 36898 - 37245 (+)
Type: pfam
Location: 36898 - 37245 (+)
Gene ID: Rep_3495_c_104_34
Type: TC
Location: 37260 - 39797 (+)
Type: TC
Location: 37260 - 39797 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.