Cluster: Rep_3495_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3495
- CGC Family ID: CGCFAM_11282
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3495_c_79 | Rep_3495_c_79_9 | 6976 | 9330 | + | 3.A.9.1.2 |
| CAZyme | Rep_3495_c_79 | Rep_3495_c_79_10 | 9687 | 12125 | + | GT35 |
| TC | Rep_3495_c_79 | Rep_3495_c_79_11 | 12384 | 13625 | - | 2.A.37.2.2 |
| TC | Rep_3495_c_79 | Rep_3495_c_79_12 | 13850 | 15628 | - | 2.A.58.2.2 |
| TC | Rep_3495_c_79 | Rep_3495_c_79_13 | 15886 | 16431 | - | 9.A.11.1.1 |
| CAZyme | Rep_3495_c_79 | Rep_3495_c_79_14 | 16602 | 18188 | + | GH5_4 |
Gene ID: Rep_3495_c_79_9
Type: TC
Location: 6976 - 9330 (+)
Type: TC
Location: 6976 - 9330 (+)
Gene ID: Rep_3495_c_79_10
Type: CAZyme
Location: 9687 - 12125 (+)
Type: CAZyme
Location: 9687 - 12125 (+)
Gene ID: Rep_3495_c_79_11
Type: TC
Location: 12384 - 13625 (-)
Type: TC
Location: 12384 - 13625 (-)
Gene ID: Rep_3495_c_79_12
Type: TC
Location: 13850 - 15628 (-)
Type: TC
Location: 13850 - 15628 (-)
Gene ID: Rep_3495_c_79_13
Type: TC
Location: 15886 - 16431 (-)
Type: TC
Location: 15886 - 16431 (-)
Gene ID: Rep_3495_c_79_14
Type: CAZyme
Location: 16602 - 18188 (+)
Type: CAZyme
Location: 16602 - 18188 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.