Cluster: Rep_3495_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3495
- CGC Family ID: CGCFAM_03346
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3495_c_57 | Rep_3495_c_57_16 | 18922 | 20460 | + | GH13_44 |
| TF | Rep_3495_c_57 | Rep_3495_c_57_17 | 20558 | 21346 | - | HTH_AraC |
| TC | Rep_3495_c_57 | Rep_3495_c_57_18 | 21584 | 22447 | - | 2.A.119.2.1 |
Gene ID: Rep_3495_c_57_16
Type: CAZyme
Location: 18922 - 20460 (+)
Type: CAZyme
Location: 18922 - 20460 (+)
Gene ID: Rep_3495_c_57_17
Type: TF
Location: 20558 - 21346 (-)
Type: TF
Location: 20558 - 21346 (-)
Gene ID: Rep_3495_c_57_18
Type: TC
Location: 21584 - 22447 (-)
Type: TC
Location: 21584 - 22447 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.