Cluster: Rep_3495_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3495
- CGC Family ID: CGCFAM_11280
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3495_c_51 | Rep_3495_c_51_12 | 8580 | 10997 | - | CBM35 | GH26 |
| TF | Rep_3495_c_51 | Rep_3495_c_51_13 | 11380 | 11889 | + | GerE |
| NULL(UNKNOWN) | Rep_3495_c_51 | Rep_3495_c_51_14 | 11876 | 13729 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3495_c_51 | Rep_3495_c_51_15 | 13935 | 14564 | + | 1.A.16.5.2 |
Gene ID: Rep_3495_c_51_12
Type: CAZyme
Location: 8580 - 10997 (-)
Type: CAZyme
Location: 8580 - 10997 (-)
Gene ID: Rep_3495_c_51_13
Type: TF
Location: 11380 - 11889 (+)
Type: TF
Location: 11380 - 11889 (+)
Gene ID: Rep_3495_c_51_14
Type:
Location: 11876 - 13729 (+)
Type:
Location: 11876 - 13729 (+)
Gene ID: Rep_3495_c_51_15
Type: TC
Location: 13935 - 14564 (+)
Type: TC
Location: 13935 - 14564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.