Cluster: Rep_3495_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3495
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3495_c_49 | Rep_3495_c_49_23 | 28356 | 29375 | + | 9.A.40.2.2 |
| pfam | Rep_3495_c_49 | Rep_3495_c_49_24 | 29399 | 29857 | + | LacAB_rpiB |
| CAZyme | Rep_3495_c_49 | Rep_3495_c_49_25 | 30013 | 32001 | - | GH5_1 |
Gene ID: Rep_3495_c_49_23
Type: TC
Location: 28356 - 29375 (+)
Type: TC
Location: 28356 - 29375 (+)
Gene ID: Rep_3495_c_49_24
Type: pfam
Location: 29399 - 29857 (+)
Type: pfam
Location: 29399 - 29857 (+)
Gene ID: Rep_3495_c_49_25
Type: CAZyme
Location: 30013 - 32001 (-)
Type: CAZyme
Location: 30013 - 32001 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.