Cluster: Rep_3494_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3494
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3494_c_54 | Rep_3494_c_54_36 | 26967 | 27986 | + | 9.A.40.2.2 |
| pfam | Rep_3494_c_54 | Rep_3494_c_54_37 | 28008 | 28466 | + | LacAB_rpiB |
| CAZyme | Rep_3494_c_54 | Rep_3494_c_54_38 | 28525 | 30531 | - | GH5_1 |
Gene ID: Rep_3494_c_54_36
Type: TC
Location: 26967 - 27986 (+)
Type: TC
Location: 26967 - 27986 (+)
Gene ID: Rep_3494_c_54_37
Type: pfam
Location: 28008 - 28466 (+)
Type: pfam
Location: 28008 - 28466 (+)
Gene ID: Rep_3494_c_54_38
Type: CAZyme
Location: 28525 - 30531 (-)
Type: CAZyme
Location: 28525 - 30531 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.