Cluster: Rep_3494_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3494
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3494_c_54 | Rep_3494_c_54_20 | 9986 | 10843 | - | CE4 |
| TC | Rep_3494_c_54 | Rep_3494_c_54_21 | 11005 | 13119 | + | 1.B.52.2.1 |
| pfam | Rep_3494_c_54 | Rep_3494_c_54_22 | 13148 | 14227 | + | PFK |
| STP | Rep_3494_c_54 | Rep_3494_c_54_23 | 14284 | 15087 | + | Spo0A_C |
| TC | Rep_3494_c_54 | Rep_3494_c_54_24 | 15127 | 15828 | + | 3.A.1.122.7 |
Gene ID: Rep_3494_c_54_20
Type: CAZyme
Location: 9986 - 10843 (-)
Type: CAZyme
Location: 9986 - 10843 (-)
Gene ID: Rep_3494_c_54_21
Type: TC
Location: 11005 - 13119 (+)
Type: TC
Location: 11005 - 13119 (+)
Gene ID: Rep_3494_c_54_22
Type: pfam
Location: 13148 - 14227 (+)
Type: pfam
Location: 13148 - 14227 (+)
Gene ID: Rep_3494_c_54_23
Type: STP
Location: 14284 - 15087 (+)
Type: STP
Location: 14284 - 15087 (+)
Gene ID: Rep_3494_c_54_24
Type: TC
Location: 15127 - 15828 (+)
Type: TC
Location: 15127 - 15828 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.