Cluster: Rep_3494_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3494
- CGC Family ID: CGCFAM_00766
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3494_c_52 | Rep_3494_c_52_16 | 18776 | 21004 | + | GT51 |
| pfam | Rep_3494_c_52 | Rep_3494_c_52_17 | 21100 | 22215 | + | UPF0020 | THUMP | RlmL_1st |
| TC | Rep_3494_c_52 | Rep_3494_c_52_18 | 22228 | 23619 | + | 3.A.24.3.1 |
Gene ID: Rep_3494_c_52_16
Type: CAZyme
Location: 18776 - 21004 (+)
Type: CAZyme
Location: 18776 - 21004 (+)
Gene ID: Rep_3494_c_52_17
Type: pfam
Location: 21100 - 22215 (+)
Type: pfam
Location: 21100 - 22215 (+)
Gene ID: Rep_3494_c_52_18
Type: TC
Location: 22228 - 23619 (+)
Type: TC
Location: 22228 - 23619 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.