Cluster: Rep_3494_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3494
- CGC Family ID: CGCFAM_01578
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3494_c_23 | Rep_3494_c_23_12 | 16010 | 16966 | + | 3.A.1.1.20 |
| TC | Rep_3494_c_23 | Rep_3494_c_23_13 | 16984 | 17865 | + | 3.A.1.1.26 |
| CAZyme | Rep_3494_c_23 | Rep_3494_c_23_14 | 18183 | 20591 | + | GH94 |
Gene ID: Rep_3494_c_23_12
Type: TC
Location: 16010 - 16966 (+)
Type: TC
Location: 16010 - 16966 (+)
Gene ID: Rep_3494_c_23_13
Type: TC
Location: 16984 - 17865 (+)
Type: TC
Location: 16984 - 17865 (+)
Gene ID: Rep_3494_c_23_14
Type: CAZyme
Location: 18183 - 20591 (+)
Type: CAZyme
Location: 18183 - 20591 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.