Cluster: Rep_3494_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3494
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3494_c_104 | Rep_3494_c_104_7 | 6823 | 7989 | - | GH5_4 |
| pfam | Rep_3494_c_104 | Rep_3494_c_104_8 | 8206 | 8727 | - | GtrA_DPMS_TM |
| TC | Rep_3494_c_104 | Rep_3494_c_104_9 | 8887 | 10140 | + | 9.A.40.2.2 |
Gene ID: Rep_3494_c_104_7
Type: CAZyme
Location: 6823 - 7989 (-)
Type: CAZyme
Location: 6823 - 7989 (-)
Gene ID: Rep_3494_c_104_8
Type: pfam
Location: 8206 - 8727 (-)
Type: pfam
Location: 8206 - 8727 (-)
Gene ID: Rep_3494_c_104_9
Type: TC
Location: 8887 - 10140 (+)
Type: TC
Location: 8887 - 10140 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.