Cluster: Rep_3494_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3494
- CGC Family ID: CGCFAM_11283
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3494_c_2 | Rep_3494_c_2_1 | 3 | 788 | + | GH5_4 |
| CAZyme | Rep_3494_c_2 | Rep_3494_c_2_2 | 863 | 2377 | - | CE2 |
| pfam | Rep_3494_c_2 | Rep_3494_c_2_3 | 2541 | 3827 | - | Adenylsucc_synt |
| pfam | Rep_3494_c_2 | Rep_3494_c_2_4 | 4054 | 4401 | + | Trns_repr_metal |
| TC | Rep_3494_c_2 | Rep_3494_c_2_5 | 4417 | 6960 | + | 3.A.3.5.15 |
| TC | Rep_3494_c_2 | Rep_3494_c_2_6 | 7422 | 10025 | + | 3.A.3.2.21 |
Gene ID: Rep_3494_c_2_1
Type: CAZyme
Location: 3 - 788 (+)
Type: CAZyme
Location: 3 - 788 (+)
Gene ID: Rep_3494_c_2_2
Type: CAZyme
Location: 863 - 2377 (-)
Type: CAZyme
Location: 863 - 2377 (-)
Gene ID: Rep_3494_c_2_3
Type: pfam
Location: 2541 - 3827 (-)
Type: pfam
Location: 2541 - 3827 (-)
Gene ID: Rep_3494_c_2_4
Type: pfam
Location: 4054 - 4401 (+)
Type: pfam
Location: 4054 - 4401 (+)
Gene ID: Rep_3494_c_2_5
Type: TC
Location: 4417 - 6960 (+)
Type: TC
Location: 4417 - 6960 (+)
Gene ID: Rep_3494_c_2_6
Type: TC
Location: 7422 - 10025 (+)
Type: TC
Location: 7422 - 10025 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.