Cluster: Rep_3494_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3494
- CGC Family ID: CGCFAM_11282
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3494_c_73 | Rep_3494_c_73_1 | 314 | 2092 | + | 2.A.58.2.2 |
| TC | Rep_3494_c_73 | Rep_3494_c_73_2 | 2286 | 3527 | + | 2.A.37.2.2 |
| CAZyme | Rep_3494_c_73 | Rep_3494_c_73_3 | 3925 | 6363 | - | GT35 |
| TC | Rep_3494_c_73 | Rep_3494_c_73_4 | 6721 | 9075 | - | 3.A.9.1.2 |
Gene ID: Rep_3494_c_73_1
Type: TC
Location: 314 - 2092 (+)
Type: TC
Location: 314 - 2092 (+)
Gene ID: Rep_3494_c_73_2
Type: TC
Location: 2286 - 3527 (+)
Type: TC
Location: 2286 - 3527 (+)
Gene ID: Rep_3494_c_73_3
Type: CAZyme
Location: 3925 - 6363 (-)
Type: CAZyme
Location: 3925 - 6363 (-)
Gene ID: Rep_3494_c_73_4
Type: TC
Location: 6721 - 9075 (-)
Type: TC
Location: 6721 - 9075 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.