Cluster: Rep_3494_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3494
- CGC Family ID: CGCFAM_00996
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3494_c_66 | Rep_3494_c_66_6 | 2657 | 4531 | + | 3.A.1.111.2 |
| TC | Rep_3494_c_66 | Rep_3494_c_66_7 | 4524 | 6422 | + | 3.A.1.106.1 |
| peptidase | Rep_3494_c_66 | Rep_3494_c_66_8 | 6578 | 7468 | - | S09.UPA |
| CAZyme | Rep_3494_c_66 | Rep_3494_c_66_9 | 7513 | 9420 | - | CE1 |
| NULL(UNKNOWN) | Rep_3494_c_66 | Rep_3494_c_66_10 | 9437 | 10474 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3494_c_66 | Rep_3494_c_66_11 | 10594 | 11436 | - | 8.A.5.1.4 |
| TC | Rep_3494_c_66 | Rep_3494_c_66_12 | 11440 | 12450 | - | 8.A.5.1.4 |
Gene ID: Rep_3494_c_66_6
Type: TC
Location: 2657 - 4531 (+)
Type: TC
Location: 2657 - 4531 (+)
Gene ID: Rep_3494_c_66_7
Type: TC
Location: 4524 - 6422 (+)
Type: TC
Location: 4524 - 6422 (+)
Gene ID: Rep_3494_c_66_8
Type: peptidase
Location: 6578 - 7468 (-)
Type: peptidase
Location: 6578 - 7468 (-)
Gene ID: Rep_3494_c_66_9
Type: CAZyme
Location: 7513 - 9420 (-)
Type: CAZyme
Location: 7513 - 9420 (-)
Gene ID: Rep_3494_c_66_10
Type:
Location: 9437 - 10474 (-)
Type:
Location: 9437 - 10474 (-)
Gene ID: Rep_3494_c_66_11
Type: TC
Location: 10594 - 11436 (-)
Type: TC
Location: 10594 - 11436 (-)
Gene ID: Rep_3494_c_66_12
Type: TC
Location: 11440 - 12450 (-)
Type: TC
Location: 11440 - 12450 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.