Cluster: Rep_3494_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3494
- CGC Family ID: CGCFAM_01246
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3494_c_65 | Rep_3494_c_65_1 | 195 | 1676 | + | GH77 |
| CAZyme | Rep_3494_c_65 | Rep_3494_c_65_2 | 1697 | 4099 | + | GT35 |
| peptidase | Rep_3494_c_65 | Rep_3494_c_65_3 | 4178 | 5803 | - | C82.001 |
| TC | Rep_3494_c_65 | Rep_3494_c_65_4 | 6096 | 6692 | + | 2.A.115.2.14 |
Gene ID: Rep_3494_c_65_1
Type: CAZyme
Location: 195 - 1676 (+)
Type: CAZyme
Location: 195 - 1676 (+)
Gene ID: Rep_3494_c_65_2
Type: CAZyme
Location: 1697 - 4099 (+)
Type: CAZyme
Location: 1697 - 4099 (+)
Gene ID: Rep_3494_c_65_3
Type: peptidase
Location: 4178 - 5803 (-)
Type: peptidase
Location: 4178 - 5803 (-)
Gene ID: Rep_3494_c_65_4
Type: TC
Location: 6096 - 6692 (+)
Type: TC
Location: 6096 - 6692 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.