Cluster: Rep_3494_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3494
- CGC Family ID: CGCFAM_04623
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3494_c_61 | Rep_3494_c_61_3 | 4153 | 5121 | - | 3.A.1.103.6 |
| pfam | Rep_3494_c_61 | Rep_3494_c_61_4 | 5143 | 6006 | - | ABC2_membrane |
| pfam | Rep_3494_c_61 | Rep_3494_c_61_5 | 6359 | 7492 | - | Glyphos_transf |
| CAZyme | Rep_3494_c_61 | Rep_3494_c_61_6 | 7505 | 8347 | - | GT2 |
Gene ID: Rep_3494_c_61_3
Type: TC
Location: 4153 - 5121 (-)
Type: TC
Location: 4153 - 5121 (-)
Gene ID: Rep_3494_c_61_4
Type: pfam
Location: 5143 - 6006 (-)
Type: pfam
Location: 5143 - 6006 (-)
Gene ID: Rep_3494_c_61_5
Type: pfam
Location: 6359 - 7492 (-)
Type: pfam
Location: 6359 - 7492 (-)
Gene ID: Rep_3494_c_61_6
Type: CAZyme
Location: 7505 - 8347 (-)
Type: CAZyme
Location: 7505 - 8347 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.