Cluster: Rep_3494_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3494
- CGC Family ID: CGCFAM_04693
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3494_c_56 | Rep_3494_c_56_30 | 28046 | 30025 | - | GH26 |
| CAZyme | Rep_3494_c_56 | Rep_3494_c_56_31 | 30048 | 32336 | - | GH95 |
| pfam | Rep_3494_c_56 | Rep_3494_c_56_32 | 33044 | 35056 | + | pAdhesive_15 |
| TC | Rep_3494_c_56 | Rep_3494_c_56_33 | 35523 | 37793 | + | 3.A.1.135.5 |
Gene ID: Rep_3494_c_56_30
Type: CAZyme
Location: 28046 - 30025 (-)
Type: CAZyme
Location: 28046 - 30025 (-)
Gene ID: Rep_3494_c_56_31
Type: CAZyme
Location: 30048 - 32336 (-)
Type: CAZyme
Location: 30048 - 32336 (-)
Gene ID: Rep_3494_c_56_32
Type: pfam
Location: 33044 - 35056 (+)
Type: pfam
Location: 33044 - 35056 (+)
Gene ID: Rep_3494_c_56_33
Type: TC
Location: 35523 - 37793 (+)
Type: TC
Location: 35523 - 37793 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
YE71
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.