Cluster: Rep_3487_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3487
- CGC Family ID: CGCFAM_01800
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3487_c_21 | Rep_3487_c_21_2 | 1598 | 2671 | - | GH25 |
| TC | Rep_3487_c_21 | Rep_3487_c_21_3 | 2695 | 3129 | - | 1.E.19.1.10 |
| NULL(UNKNOWN) | Rep_3487_c_21 | Rep_3487_c_21_4 | 3126 | 4334 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_3487_c_21 | Rep_3487_c_21_5 | 4598 | 5158 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3487_c_21 | Rep_3487_c_21_6 | 5498 | 6688 | + | 3.A.11.1.3 |
Gene ID: Rep_3487_c_21_2
Type: CAZyme
Location: 1598 - 2671 (-)
Type: CAZyme
Location: 1598 - 2671 (-)
Gene ID: Rep_3487_c_21_3
Type: TC
Location: 2695 - 3129 (-)
Type: TC
Location: 2695 - 3129 (-)
Gene ID: Rep_3487_c_21_4
Type:
Location: 3126 - 4334 (-)
Type:
Location: 3126 - 4334 (-)
Gene ID: Rep_3487_c_21_5
Type:
Location: 4598 - 5158 (+)
Type:
Location: 4598 - 5158 (+)
Gene ID: Rep_3487_c_21_6
Type: TC
Location: 5498 - 6688 (+)
Type: TC
Location: 5498 - 6688 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
JAAZZIT01
Species
JAAZZIT01 sp944382845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.