Cluster: Rep_3487_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3487
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3487_c_6 | Rep_3487_c_6_24 | 33195 | 34076 | - | 2.A.115.1.1 |
| pfam | Rep_3487_c_6 | Rep_3487_c_6_25 | 34130 | 34588 | - | C_GCAxxG_C_C |
| CAZyme | Rep_3487_c_6 | Rep_3487_c_6_26 | 34604 | 36109 | - | CE20 |
| TC | Rep_3487_c_6 | Rep_3487_c_6_27 | 36133 | 37749 | - | 3.A.1.121.4 |
| TC | Rep_3487_c_6 | Rep_3487_c_6_28 | 37899 | 38369 | + | 9.A.24.1.7 |
Gene ID: Rep_3487_c_6_24
Type: TC
Location: 33195 - 34076 (-)
Type: TC
Location: 33195 - 34076 (-)
Gene ID: Rep_3487_c_6_25
Type: pfam
Location: 34130 - 34588 (-)
Type: pfam
Location: 34130 - 34588 (-)
Gene ID: Rep_3487_c_6_26
Type: CAZyme
Location: 34604 - 36109 (-)
Type: CAZyme
Location: 34604 - 36109 (-)
Gene ID: Rep_3487_c_6_27
Type: TC
Location: 36133 - 37749 (-)
Type: TC
Location: 36133 - 37749 (-)
Gene ID: Rep_3487_c_6_28
Type: TC
Location: 37899 - 38369 (+)
Type: TC
Location: 37899 - 38369 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
JAAZZIT01
Species
JAAZZIT01 sp944382845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.