Cluster: Rep_3487_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3487
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3487_c_114 | Rep_3487_c_114_3 | 2109 | 3398 | + | 2.A.25.1.3 |
| pfam | Rep_3487_c_114 | Rep_3487_c_114_4 | 3630 | 4037 | - | MGS |
| TC | Rep_3487_c_114 | Rep_3487_c_114_5 | 4085 | 4822 | - | 8.A.3.2.2 |
| peptidase | Rep_3487_c_114 | Rep_3487_c_114_6 | 5148 | 6017 | - | A25.001 |
| pfam | Rep_3487_c_114 | Rep_3487_c_114_7 | 6260 | 6517 | + | Ribosomal_S20p |
| CAZyme | Rep_3487_c_114 | Rep_3487_c_114_8 | 6749 | 9874 | + | GH25 |
Gene ID: Rep_3487_c_114_3
Type: TC
Location: 2109 - 3398 (+)
Type: TC
Location: 2109 - 3398 (+)
Gene ID: Rep_3487_c_114_4
Type: pfam
Location: 3630 - 4037 (-)
Type: pfam
Location: 3630 - 4037 (-)
Gene ID: Rep_3487_c_114_5
Type: TC
Location: 4085 - 4822 (-)
Type: TC
Location: 4085 - 4822 (-)
Gene ID: Rep_3487_c_114_6
Type: peptidase
Location: 5148 - 6017 (-)
Type: peptidase
Location: 5148 - 6017 (-)
Gene ID: Rep_3487_c_114_7
Type: pfam
Location: 6260 - 6517 (+)
Type: pfam
Location: 6260 - 6517 (+)
Gene ID: Rep_3487_c_114_8
Type: CAZyme
Location: 6749 - 9874 (+)
Type: CAZyme
Location: 6749 - 9874 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
JAAZZIT01
Species
JAAZZIT01 sp944382845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.