Cluster: Rep_3487_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3487
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3487_c_109 | Rep_3487_c_109_2 | 287 | 3298 | - | 3.A.1.122.14 |
| TF | Rep_3487_c_109 | Rep_3487_c_109_3 | 3335 | 3781 | - | MarR |
| CAZyme | Rep_3487_c_109 | Rep_3487_c_109_4 | 4064 | 5086 | - | GH5_37 |
Gene ID: Rep_3487_c_109_2
Type: TC
Location: 287 - 3298 (-)
Type: TC
Location: 287 - 3298 (-)
Gene ID: Rep_3487_c_109_3
Type: TF
Location: 3335 - 3781 (-)
Type: TF
Location: 3335 - 3781 (-)
Gene ID: Rep_3487_c_109_4
Type: CAZyme
Location: 4064 - 5086 (-)
Type: CAZyme
Location: 4064 - 5086 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
JAAZZIT01
Species
JAAZZIT01 sp944382845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.