Cluster: Rep_3481_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3481
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3481_c_5 | Rep_3481_c_5_19 | 19959 | 21524 | - | 2.A.21.2.4 |
| CAZyme | Rep_3481_c_5 | Rep_3481_c_5_20 | 21704 | 24130 | + | CBM3 | GH9 |
| CAZyme | Rep_3481_c_5 | Rep_3481_c_5_21 | 24430 | 27477 | + | CBM4 | GH9 |
Gene ID: Rep_3481_c_5_19
Type: TC
Location: 19959 - 21524 (-)
Type: TC
Location: 19959 - 21524 (-)
Gene ID: Rep_3481_c_5_20
Type: CAZyme
Location: 21704 - 24130 (+)
Type: CAZyme
Location: 21704 - 24130 (+)
Gene ID: Rep_3481_c_5_21
Type: CAZyme
Location: 24430 - 27477 (+)
Type: CAZyme
Location: 24430 - 27477 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900545125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.