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Cluster: Rep_3481_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3481_c_5 Rep_3481_c_5_3 2008 3114 + GT4
pfam Rep_3481_c_5 Rep_3481_c_5_4 3132 4181 + PS_pyruv_trans
CAZyme Rep_3481_c_5 Rep_3481_c_5_5 4250 5284 + GT113
CAZyme Rep_3481_c_5 Rep_3481_c_5_6 5299 6345 + GT2
CAZyme Rep_3481_c_5 Rep_3481_c_5_7 6342 7514 + GT4
NULL(UNKNOWN) Rep_3481_c_5 Rep_3481_c_5_8 7528 8781 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3481_c_5 Rep_3481_c_5_9 8826 9896 + GT2
TC Rep_3481_c_5 Rep_3481_c_5_10 9886 11436 + 2.A.66.1.40
Gene ID: Rep_3481_c_5_3
Type: CAZyme
Location: 2008 - 3114 (+)
Gene ID: Rep_3481_c_5_4
Type: pfam
Location: 3132 - 4181 (+)
Gene ID: Rep_3481_c_5_5
Type: CAZyme
Location: 4250 - 5284 (+)
Gene ID: Rep_3481_c_5_6
Type: CAZyme
Location: 5299 - 6345 (+)
Gene ID: Rep_3481_c_5_7
Type: CAZyme
Location: 6342 - 7514 (+)
Gene ID: Rep_3481_c_5_8
Type:
Location: 7528 - 8781 (+)
Gene ID: Rep_3481_c_5_9
Type: CAZyme
Location: 8826 - 9896 (+)
Gene ID: Rep_3481_c_5_10
Type: TC
Location: 9886 - 11436 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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