Cluster: Rep_3481_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3481
- CGC Family ID: CGCFAM_03164
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3481_c_144 | Rep_3481_c_144_1 | 1 | 777 | + | CE12 |
| pfam | Rep_3481_c_144 | Rep_3481_c_144_2 | 877 | 1062 | - | Ribosomal_L28 |
| TC | Rep_3481_c_144 | Rep_3481_c_144_3 | 1337 | 2029 | + | 9.B.149.1.11 |
Gene ID: Rep_3481_c_144_1
Type: CAZyme
Location: 1 - 777 (+)
Type: CAZyme
Location: 1 - 777 (+)
Gene ID: Rep_3481_c_144_2
Type: pfam
Location: 877 - 1062 (-)
Type: pfam
Location: 877 - 1062 (-)
Gene ID: Rep_3481_c_144_3
Type: TC
Location: 1337 - 2029 (+)
Type: TC
Location: 1337 - 2029 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900545125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.