Cluster: Rep_3481_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3481
- CGC Family ID: CGCFAM_00002
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3481_c_123 | Rep_3481_c_123_3 | 1600 | 2526 | - | 9.B.102.7.10 |
| CAZyme | Rep_3481_c_123 | Rep_3481_c_123_4 | 2510 | 3541 | - | GT4 |
| CAZyme | Rep_3481_c_123 | Rep_3481_c_123_5 | 3489 | 4481 | - | GT2 |
Gene ID: Rep_3481_c_123_3
Type: TC
Location: 1600 - 2526 (-)
Type: TC
Location: 1600 - 2526 (-)
Gene ID: Rep_3481_c_123_4
Type: CAZyme
Location: 2510 - 3541 (-)
Type: CAZyme
Location: 2510 - 3541 (-)
Gene ID: Rep_3481_c_123_5
Type: CAZyme
Location: 3489 - 4481 (-)
Type: CAZyme
Location: 3489 - 4481 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900545125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.