Cluster: Rep_3481_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3481
- CGC Family ID: CGCFAM_01391
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3481_c_112 | Rep_3481_c_112_1 | 36 | 1520 | - | GH3 |
| STP | Rep_3481_c_112 | Rep_3481_c_112_2 | 1538 | 1951 | - | NUDIX |
| pfam | Rep_3481_c_112 | Rep_3481_c_112_3 | 2169 | 2519 | - | Hpt |
| TC | Rep_3481_c_112 | Rep_3481_c_112_4 | 2558 | 4078 | - | 8.A.59.4.1 |
Gene ID: Rep_3481_c_112_1
Type: CAZyme
Location: 36 - 1520 (-)
Type: CAZyme
Location: 36 - 1520 (-)
Gene ID: Rep_3481_c_112_2
Type: STP
Location: 1538 - 1951 (-)
Type: STP
Location: 1538 - 1951 (-)
Gene ID: Rep_3481_c_112_3
Type: pfam
Location: 2169 - 2519 (-)
Type: pfam
Location: 2169 - 2519 (-)
Gene ID: Rep_3481_c_112_4
Type: TC
Location: 2558 - 4078 (-)
Type: TC
Location: 2558 - 4078 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900545125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.