Cluster: Rep_3481_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3481
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3481_c_70 | Rep_3481_c_70_1 | 3 | 2852 | + | CBM6 | PL1_2 |
| pfam | Rep_3481_c_70 | Rep_3481_c_70_2 | 3093 | 5180 | + | Gln-synt_C | GSIII_N | Gln-synt_C-ter |
| TC | Rep_3481_c_70 | Rep_3481_c_70_3 | 5217 | 6944 | + | 3.A.18.1.1 |
Gene ID: Rep_3481_c_70_1
Type: CAZyme
Location: 3 - 2852 (+)
Type: CAZyme
Location: 3 - 2852 (+)
Gene ID: Rep_3481_c_70_2
Type: pfam
Location: 3093 - 5180 (+)
Type: pfam
Location: 3093 - 5180 (+)
Gene ID: Rep_3481_c_70_3
Type: TC
Location: 5217 - 6944 (+)
Type: TC
Location: 5217 - 6944 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900545125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.