Cluster: Rep_3481_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3481
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3481_c_40 | Rep_3481_c_40_1 | 4 | 1197 | - | 2.A.36.2.1 |
| NULL(UNKNOWN) | Rep_3481_c_40 | Rep_3481_c_40_2 | 1577 | 1885 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3481_c_40 | Rep_3481_c_40_3 | 1929 | 3827 | - | CBM13 | GH53 |
Gene ID: Rep_3481_c_40_1
Type: TC
Location: 4 - 1197 (-)
Type: TC
Location: 4 - 1197 (-)
Gene ID: Rep_3481_c_40_2
Type:
Location: 1577 - 1885 (+)
Type:
Location: 1577 - 1885 (+)
Gene ID: Rep_3481_c_40_3
Type: CAZyme
Location: 1929 - 3827 (-)
Type: CAZyme
Location: 1929 - 3827 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900545125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.