Cluster: Rep_3481_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3481
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3481_c_37 | Rep_3481_c_37_3 | 5586 | 7511 | + | 3.A.1.121.4 |
| pfam | Rep_3481_c_37 | Rep_3481_c_37_4 | 7683 | 7820 | + | SCIFF |
| pfam | Rep_3481_c_37 | Rep_3481_c_37_5 | 7911 | 9287 | + | Radical_SAM | SPASM | Fer4_12 |
| CAZyme | Rep_3481_c_37 | Rep_3481_c_37_6 | 9342 | 11051 | - | CBM22 | CE1 |
Gene ID: Rep_3481_c_37_3
Type: TC
Location: 5586 - 7511 (+)
Type: TC
Location: 5586 - 7511 (+)
Gene ID: Rep_3481_c_37_4
Type: pfam
Location: 7683 - 7820 (+)
Type: pfam
Location: 7683 - 7820 (+)
Gene ID: Rep_3481_c_37_5
Type: pfam
Location: 7911 - 9287 (+)
Type: pfam
Location: 7911 - 9287 (+)
Gene ID: Rep_3481_c_37_6
Type: CAZyme
Location: 9342 - 11051 (-)
Type: CAZyme
Location: 9342 - 11051 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900545125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.