Cluster: Rep_3481_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3481
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3481_c_18 | Rep_3481_c_18_1 | 1 | 1599 | + | GH43_16 |
| TC | Rep_3481_c_18 | Rep_3481_c_18_2 | 1861 | 3192 | + | 2.A.66.1.37 |
| pfam | Rep_3481_c_18 | Rep_3481_c_18_3 | 3289 | 3729 | + | SpoVAC_SpoVAEB |
| pfam | Rep_3481_c_18 | Rep_3481_c_18_4 | 4071 | 4892 | - | CAP | Dockerin_1 |
| CAZyme | Rep_3481_c_18 | Rep_3481_c_18_5 | 5488 | 8121 | + | GH74 |
Gene ID: Rep_3481_c_18_1
Type: CAZyme
Location: 1 - 1599 (+)
Type: CAZyme
Location: 1 - 1599 (+)
Gene ID: Rep_3481_c_18_2
Type: TC
Location: 1861 - 3192 (+)
Type: TC
Location: 1861 - 3192 (+)
Gene ID: Rep_3481_c_18_3
Type: pfam
Location: 3289 - 3729 (+)
Type: pfam
Location: 3289 - 3729 (+)
Gene ID: Rep_3481_c_18_4
Type: pfam
Location: 4071 - 4892 (-)
Type: pfam
Location: 4071 - 4892 (-)
Gene ID: Rep_3481_c_18_5
Type: CAZyme
Location: 5488 - 8121 (+)
Type: CAZyme
Location: 5488 - 8121 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900545125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.