Cluster: Rep_3481_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3481
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3481_c_0 | Rep_3481_c_0_25 | 31841 | 33319 | + | GH43_35 |
| NULL(UNKNOWN) | Rep_3481_c_0 | Rep_3481_c_0_26 | 33490 | 35109 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3481_c_0 | Rep_3481_c_0_27 | 35174 | 36439 | + | 9.A.40.2.4 |
| TC | Rep_3481_c_0 | Rep_3481_c_0_28 | 36611 | 37387 | + | 3.A.1.103.4 |
| TC | Rep_3481_c_0 | Rep_3481_c_0_29 | 37388 | 38656 | + | 3.A.1.103.4 |
Gene ID: Rep_3481_c_0_25
Type: CAZyme
Location: 31841 - 33319 (+)
Type: CAZyme
Location: 31841 - 33319 (+)
Gene ID: Rep_3481_c_0_26
Type:
Location: 33490 - 35109 (+)
Type:
Location: 33490 - 35109 (+)
Gene ID: Rep_3481_c_0_27
Type: TC
Location: 35174 - 36439 (+)
Type: TC
Location: 35174 - 36439 (+)
Gene ID: Rep_3481_c_0_28
Type: TC
Location: 36611 - 37387 (+)
Type: TC
Location: 36611 - 37387 (+)
Gene ID: Rep_3481_c_0_29
Type: TC
Location: 37388 - 38656 (+)
Type: TC
Location: 37388 - 38656 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900545125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.